Cluster: HRGMv2_0721_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0721
- CGC Family ID: CGCFAM_01834
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0721_24 | HRGMv2_0721_24_12 | 12483 | 13433 | + | 3.A.1.1.36 |
| NULL(UNKNOWN) | HRGMv2_0721_24 | HRGMv2_0721_24_13 | 13494 | 16538 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0721_24 | HRGMv2_0721_24_14 | 16559 | 18568 | + | GH163 |
| pfam | HRGMv2_0721_24 | HRGMv2_0721_24_15 | 18766 | 25071 | + | Big_2 | Big_2 |
| CAZyme | HRGMv2_0721_24 | HRGMv2_0721_24_16 | 25508 | 26800 | - | GH4 |
Gene ID: HRGMv2_0721_24_12
Type: TC
Location: 12483 - 13433 (+)
Type: TC
Location: 12483 - 13433 (+)
Gene ID: HRGMv2_0721_24_13
Type:
Location: 13494 - 16538 (+)
Type:
Location: 13494 - 16538 (+)
Gene ID: HRGMv2_0721_24_14
Type: CAZyme
Location: 16559 - 18568 (+)
Type: CAZyme
Location: 16559 - 18568 (+)
Gene ID: HRGMv2_0721_24_15
Type: pfam
Location: 18766 - 25071 (+)
Type: pfam
Location: 18766 - 25071 (+)
Gene ID: HRGMv2_0721_24_16
Type: CAZyme
Location: 25508 - 26800 (-)
Type: CAZyme
Location: 25508 - 26800 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900543755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.