Cluster: HRGMv2_0721_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0721
- CGC Family ID: CGCFAM_01142
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0721_18 | HRGMv2_0721_18_16 | 20224 | 23085 | + | GH2 |
| CAZyme | HRGMv2_0721_18 | HRGMv2_0721_18_17 | 23106 | 25400 | + | GH106 |
| STP | HRGMv2_0721_18 | HRGMv2_0721_18_18 | 25436 | 27124 | + | SBP_bac_1 |
| pfam | HRGMv2_0721_18 | HRGMv2_0721_18_19 | 27124 | 28032 | + | BPD_transp_1 |
| TC | HRGMv2_0721_18 | HRGMv2_0721_18_20 | 28025 | 28978 | + | 3.A.1.1.22 |
| NULL(UNKNOWN) | HRGMv2_0721_18 | HRGMv2_0721_18_21 | 28975 | 32196 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0721_18 | HRGMv2_0721_18_22 | 32193 | 34253 | + | GH163 |
Gene ID: HRGMv2_0721_18_16
Type: CAZyme
Location: 20224 - 23085 (+)
Type: CAZyme
Location: 20224 - 23085 (+)
Gene ID: HRGMv2_0721_18_17
Type: CAZyme
Location: 23106 - 25400 (+)
Type: CAZyme
Location: 23106 - 25400 (+)
Gene ID: HRGMv2_0721_18_18
Type: STP
Location: 25436 - 27124 (+)
Type: STP
Location: 25436 - 27124 (+)
Gene ID: HRGMv2_0721_18_19
Type: pfam
Location: 27124 - 28032 (+)
Type: pfam
Location: 27124 - 28032 (+)
Gene ID: HRGMv2_0721_18_20
Type: TC
Location: 28025 - 28978 (+)
Type: TC
Location: 28025 - 28978 (+)
Gene ID: HRGMv2_0721_18_21
Type:
Location: 28975 - 32196 (+)
Type:
Location: 28975 - 32196 (+)
Gene ID: HRGMv2_0721_18_22
Type: CAZyme
Location: 32193 - 34253 (+)
Type: CAZyme
Location: 32193 - 34253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900543755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.