Cluster: HRGMv2_0721_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0721
- CGC Family ID: CGCFAM_05706
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0721_14 | HRGMv2_0721_14_20 | 37306 | 38271 | + | 3.A.1.1.34 |
| TC | HRGMv2_0721_14 | HRGMv2_0721_14_21 | 38289 | 39158 | + | 3.A.1.1.39 |
| NULL(UNKNOWN) | HRGMv2_0721_14 | HRGMv2_0721_14_22 | 39173 | 41233 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0721_14 | HRGMv2_0721_14_23 | 41230 | 43437 | + | DUF5696 |
| TC | HRGMv2_0721_14 | HRGMv2_0721_14_24 | 43434 | 44330 | + | 3.A.1.1.11 |
| TC | HRGMv2_0721_14 | HRGMv2_0721_14_25 | 44323 | 45282 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_0721_14 | HRGMv2_0721_14_26 | 45504 | 46844 | + | GH144 |
| CAZyme | HRGMv2_0721_14 | HRGMv2_0721_14_27 | 46860 | 48035 | + | GH144 |
| TC | HRGMv2_0721_14 | HRGMv2_0721_14_28 | 48126 | 49241 | + | 3.A.1.1.22 |
| NULL(UNKNOWN) | HRGMv2_0721_14 | HRGMv2_0721_14_29 | 49739 | 50029 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0721_14 | HRGMv2_0721_14_30 | 50100 | 50636 | + | G3P_antiterm |
| CAZyme | HRGMv2_0721_14 | HRGMv2_0721_14_31 | 51299 | 53449 | + | GH3 |
Gene ID: HRGMv2_0721_14_20
Type: TC
Location: 37306 - 38271 (+)
Type: TC
Location: 37306 - 38271 (+)
Gene ID: HRGMv2_0721_14_21
Type: TC
Location: 38289 - 39158 (+)
Type: TC
Location: 38289 - 39158 (+)
Gene ID: HRGMv2_0721_14_22
Type:
Location: 39173 - 41233 (+)
Type:
Location: 39173 - 41233 (+)
Gene ID: HRGMv2_0721_14_23
Type: pfam
Location: 41230 - 43437 (+)
Type: pfam
Location: 41230 - 43437 (+)
Gene ID: HRGMv2_0721_14_24
Type: TC
Location: 43434 - 44330 (+)
Type: TC
Location: 43434 - 44330 (+)
Gene ID: HRGMv2_0721_14_25
Type: TC
Location: 44323 - 45282 (+)
Type: TC
Location: 44323 - 45282 (+)
Gene ID: HRGMv2_0721_14_26
Type: CAZyme
Location: 45504 - 46844 (+)
Type: CAZyme
Location: 45504 - 46844 (+)
Gene ID: HRGMv2_0721_14_27
Type: CAZyme
Location: 46860 - 48035 (+)
Type: CAZyme
Location: 46860 - 48035 (+)
Gene ID: HRGMv2_0721_14_28
Type: TC
Location: 48126 - 49241 (+)
Type: TC
Location: 48126 - 49241 (+)
Gene ID: HRGMv2_0721_14_29
Type:
Location: 49739 - 50029 (+)
Type:
Location: 49739 - 50029 (+)
Gene ID: HRGMv2_0721_14_30
Type: pfam
Location: 50100 - 50636 (+)
Type: pfam
Location: 50100 - 50636 (+)
Gene ID: HRGMv2_0721_14_31
Type: CAZyme
Location: 51299 - 53449 (+)
Type: CAZyme
Location: 51299 - 53449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900543755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.