Cluster: HRGMv2_0721_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0721
- CGC Family ID: CGCFAM_01137
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0721_14 | HRGMv2_0721_14_10 | 12051 | 13787 | + | GH2 |
| STP | HRGMv2_0721_14 | HRGMv2_0721_14_11 | 13784 | 15673 | + | SBP_bac_1 |
| TC | HRGMv2_0721_14 | HRGMv2_0721_14_12 | 15685 | 16632 | + | 3.A.1.1.11 |
| TC | HRGMv2_0721_14 | HRGMv2_0721_14_13 | 16646 | 17533 | + | 3.A.1.1.7 |
| CAZyme | HRGMv2_0721_14 | HRGMv2_0721_14_14 | 17563 | 19629 | + | GH43_33 |
| NULL(UNKNOWN) | HRGMv2_0721_14 | HRGMv2_0721_14_15 | 19651 | 27519 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0721_14 | HRGMv2_0721_14_16 | 28178 | 31432 | - | GH94 |
Gene ID: HRGMv2_0721_14_10
Type: CAZyme
Location: 12051 - 13787 (+)
Type: CAZyme
Location: 12051 - 13787 (+)
Gene ID: HRGMv2_0721_14_11
Type: STP
Location: 13784 - 15673 (+)
Type: STP
Location: 13784 - 15673 (+)
Gene ID: HRGMv2_0721_14_12
Type: TC
Location: 15685 - 16632 (+)
Type: TC
Location: 15685 - 16632 (+)
Gene ID: HRGMv2_0721_14_13
Type: TC
Location: 16646 - 17533 (+)
Type: TC
Location: 16646 - 17533 (+)
Gene ID: HRGMv2_0721_14_14
Type: CAZyme
Location: 17563 - 19629 (+)
Type: CAZyme
Location: 17563 - 19629 (+)
Gene ID: HRGMv2_0721_14_15
Type:
Location: 19651 - 27519 (+)
Type:
Location: 19651 - 27519 (+)
Gene ID: HRGMv2_0721_14_16
Type: CAZyme
Location: 28178 - 31432 (-)
Type: CAZyme
Location: 28178 - 31432 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900543755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.