Cluster: HRGMv2_0721_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0721
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0721_12 | HRGMv2_0721_12_13 | 14657 | 15742 | + | 9.B.18.1.2 |
| pfam | HRGMv2_0721_12 | HRGMv2_0721_12_14 | 15739 | 16578 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 |
| CAZyme | HRGMv2_0721_12 | HRGMv2_0721_12_15 | 16592 | 17719 | + | GT4 |
| CAZyme | HRGMv2_0721_12 | HRGMv2_0721_12_16 | 17719 | 18756 | + | GT4 |
| pfam | HRGMv2_0721_12 | HRGMv2_0721_12_17 | 18767 | 20008 | + | Wzy_C |
| pfam | HRGMv2_0721_12 | HRGMv2_0721_12_18 | 20001 | 20873 | + | Glycos_transf_2 |
| CAZyme | HRGMv2_0721_12 | HRGMv2_0721_12_19 | 20866 | 21849 | + | GT2 |
| CAZyme | HRGMv2_0721_12 | HRGMv2_0721_12_20 | 21862 | 22647 | + | GT32 |
| CAZyme | HRGMv2_0721_12 | HRGMv2_0721_12_21 | 22644 | 23561 | + | GT14 |
| TC | HRGMv2_0721_12 | HRGMv2_0721_12_22 | 23558 | 25327 | + | 2.A.66.1.40 |
| pfam | HRGMv2_0721_12 | HRGMv2_0721_12_23 | 25909 | 27516 | + | MatE | MatE | MurJ |
| pfam | HRGMv2_0721_12 | HRGMv2_0721_12_24 | 27876 | 28055 | - | FeoB_associated |
| TC | HRGMv2_0721_12 | HRGMv2_0721_12_25 | 28251 | 30488 | - | 9.A.8.1.6 |
Gene ID: HRGMv2_0721_12_13
Type: TC
Location: 14657 - 15742 (+)
Type: TC
Location: 14657 - 15742 (+)
Gene ID: HRGMv2_0721_12_14
Type: pfam
Location: 15739 - 16578 (+)
Type: pfam
Location: 15739 - 16578 (+)
Gene ID: HRGMv2_0721_12_15
Type: CAZyme
Location: 16592 - 17719 (+)
Type: CAZyme
Location: 16592 - 17719 (+)
Gene ID: HRGMv2_0721_12_16
Type: CAZyme
Location: 17719 - 18756 (+)
Type: CAZyme
Location: 17719 - 18756 (+)
Gene ID: HRGMv2_0721_12_17
Type: pfam
Location: 18767 - 20008 (+)
Type: pfam
Location: 18767 - 20008 (+)
Gene ID: HRGMv2_0721_12_18
Type: pfam
Location: 20001 - 20873 (+)
Type: pfam
Location: 20001 - 20873 (+)
Gene ID: HRGMv2_0721_12_19
Type: CAZyme
Location: 20866 - 21849 (+)
Type: CAZyme
Location: 20866 - 21849 (+)
Gene ID: HRGMv2_0721_12_20
Type: CAZyme
Location: 21862 - 22647 (+)
Type: CAZyme
Location: 21862 - 22647 (+)
Gene ID: HRGMv2_0721_12_21
Type: CAZyme
Location: 22644 - 23561 (+)
Type: CAZyme
Location: 22644 - 23561 (+)
Gene ID: HRGMv2_0721_12_22
Type: TC
Location: 23558 - 25327 (+)
Type: TC
Location: 23558 - 25327 (+)
Gene ID: HRGMv2_0721_12_23
Type: pfam
Location: 25909 - 27516 (+)
Type: pfam
Location: 25909 - 27516 (+)
Gene ID: HRGMv2_0721_12_24
Type: pfam
Location: 27876 - 28055 (-)
Type: pfam
Location: 27876 - 28055 (-)
Gene ID: HRGMv2_0721_12_25
Type: TC
Location: 28251 - 30488 (-)
Type: TC
Location: 28251 - 30488 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900543755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.