dbCAN Logo

Cluster: HRGMv2_0721_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0721_1 HRGMv2_0721_1_9 9056 10357 + 3.D.6.1.2
TC HRGMv2_0721_1 HRGMv2_0721_1_10 10362 11465 + 3.D.6.1.2
NULL(UNKNOWN) HRGMv2_0721_1 HRGMv2_0721_1_11 11462 12061 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0721_1 HRGMv2_0721_1_12 12058 12666 + 3.D.6.1.2
TC HRGMv2_0721_1 HRGMv2_0721_1_13 12663 13247 + 3.D.6.1.2
TC HRGMv2_0721_1 HRGMv2_0721_1_14 13263 14162 + 3.D.6.1.2
NULL(UNKNOWN) HRGMv2_0721_1 HRGMv2_0721_1_15 14472 15248 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0721_1 HRGMv2_0721_1_16 15516 16289 + CE4
Gene ID: HRGMv2_0721_1_9
Type: TC
Location: 9056 - 10357 (+)
Gene ID: HRGMv2_0721_1_10
Type: TC
Location: 10362 - 11465 (+)
Gene ID: HRGMv2_0721_1_11
Type:
Location: 11462 - 12061 (+)
Gene ID: HRGMv2_0721_1_12
Type: TC
Location: 12058 - 12666 (+)
Gene ID: HRGMv2_0721_1_13
Type: TC
Location: 12663 - 13247 (+)
Gene ID: HRGMv2_0721_1_14
Type: TC
Location: 13263 - 14162 (+)
Gene ID: HRGMv2_0721_1_15
Type:
Location: 14472 - 15248 (+)
Gene ID: HRGMv2_0721_1_16
Type: CAZyme
Location: 15516 - 16289 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List