Cluster: HRGMv2_0720_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0720
- CGC Family ID: CGCFAM_04011
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0720_15 | HRGMv2_0720_15_22 | 20676 | 21470 | + | 3.A.1.17.3 |
| TC | HRGMv2_0720_15 | HRGMv2_0720_15_23 | 21474 | 22295 | + | 3.A.1.17.8 |
| TC | HRGMv2_0720_15 | HRGMv2_0720_15_24 | 22411 | 23505 | + | 3.A.1.17.11 |
| TC | HRGMv2_0720_15 | HRGMv2_0720_15_25 | 23596 | 24360 | + | 3.A.1.17.5 |
| CAZyme | HRGMv2_0720_15 | HRGMv2_0720_15_26 | 24362 | 25396 | + | GH177 |
Gene ID: HRGMv2_0720_15_22
Type: TC
Location: 20676 - 21470 (+)
Type: TC
Location: 20676 - 21470 (+)
Gene ID: HRGMv2_0720_15_23
Type: TC
Location: 21474 - 22295 (+)
Type: TC
Location: 21474 - 22295 (+)
Gene ID: HRGMv2_0720_15_24
Type: TC
Location: 22411 - 23505 (+)
Type: TC
Location: 22411 - 23505 (+)
Gene ID: HRGMv2_0720_15_25
Type: TC
Location: 23596 - 24360 (+)
Type: TC
Location: 23596 - 24360 (+)
Gene ID: HRGMv2_0720_15_26
Type: CAZyme
Location: 24362 - 25396 (+)
Type: CAZyme
Location: 24362 - 25396 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp019416935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.