Cluster: HRGMv2_0720_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0720
- CGC Family ID: CGCFAM_02334
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0720_6 | HRGMv2_0720_6_16 | 17431 | 18597 | - | GT4 |
| STP | HRGMv2_0720_6 | HRGMv2_0720_6_17 | 18698 | 19780 | - | ATPase_2 |
| pfam | HRGMv2_0720_6 | HRGMv2_0720_6_18 | 19839 | 21128 | - | MoCF_biosynth | CinA | CinA_KH |
| TC | HRGMv2_0720_6 | HRGMv2_0720_6_19 | 21125 | 21670 | - | 4.F.1.1.7 |
| pfam | HRGMv2_0720_6 | HRGMv2_0720_6_20 | 21667 | 22959 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_0720_6 | HRGMv2_0720_6_21 | 22956 | 25652 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_0720_6_16
Type: CAZyme
Location: 17431 - 18597 (-)
Type: CAZyme
Location: 17431 - 18597 (-)
Gene ID: HRGMv2_0720_6_17
Type: STP
Location: 18698 - 19780 (-)
Type: STP
Location: 18698 - 19780 (-)
Gene ID: HRGMv2_0720_6_18
Type: pfam
Location: 19839 - 21128 (-)
Type: pfam
Location: 19839 - 21128 (-)
Gene ID: HRGMv2_0720_6_19
Type: TC
Location: 21125 - 21670 (-)
Type: TC
Location: 21125 - 21670 (-)
Gene ID: HRGMv2_0720_6_20
Type: pfam
Location: 21667 - 22959 (-)
Type: pfam
Location: 21667 - 22959 (-)
Gene ID: HRGMv2_0720_6_21
Type: TC
Location: 22956 - 25652 (-)
Type: TC
Location: 22956 - 25652 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp019416935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.