Cluster: HRGMv2_0720_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0720
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0720_51 | HRGMv2_0720_51_1 | 2 | 448 | + | 3.A.1.17.2 |
| pfam | HRGMv2_0720_51 | HRGMv2_0720_51_2 | 609 | 3335 | + | Transpeptidase | PBP_dimer | MecA_N |
| CAZyme | HRGMv2_0720_51 | HRGMv2_0720_51_3 | 3458 | 4528 | + | GT28 |
| pfam | HRGMv2_0720_51 | HRGMv2_0720_51_4 | 4525 | 6012 | + | UPF0020 | N6_Mtase | MTS | PrmA | AviRa | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_0720_51 | HRGMv2_0720_51_5 | 6393 | 7922 | + | 9.B.18.1.3 |
Gene ID: HRGMv2_0720_51_1
Type: TC
Location: 2 - 448 (+)
Type: TC
Location: 2 - 448 (+)
Gene ID: HRGMv2_0720_51_2
Type: pfam
Location: 609 - 3335 (+)
Type: pfam
Location: 609 - 3335 (+)
Gene ID: HRGMv2_0720_51_3
Type: CAZyme
Location: 3458 - 4528 (+)
Type: CAZyme
Location: 3458 - 4528 (+)
Gene ID: HRGMv2_0720_51_4
Type: pfam
Location: 4525 - 6012 (+)
Type: pfam
Location: 4525 - 6012 (+)
Gene ID: HRGMv2_0720_51_5
Type: TC
Location: 6393 - 7922 (+)
Type: TC
Location: 6393 - 7922 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp019416935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.