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Cluster: HRGMv2_0720_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0720_1 HRGMv2_0720_1_69 72492 74252 - 3.A.1.20.1
TC HRGMv2_0720_1 HRGMv2_0720_1_70 74245 75351 - 3.A.1.20.1
TC HRGMv2_0720_1 HRGMv2_0720_1_71 75424 76548 - 3.A.1.20.2
TF HRGMv2_0720_1 HRGMv2_0720_1_72 76915 77871 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0720_1 HRGMv2_0720_1_73 78173 79345 + CE9
CAZyme HRGMv2_0720_1 HRGMv2_0720_1_74 79348 80550 + CE9
TC HRGMv2_0720_1 HRGMv2_0720_1_75 80974 82692 + 3.A.1.135.5
TC HRGMv2_0720_1 HRGMv2_0720_1_76 82689 84470 + 3.A.1.135.7
Gene ID: HRGMv2_0720_1_69
Type: TC
Location: 72492 - 74252 (-)
Gene ID: HRGMv2_0720_1_70
Type: TC
Location: 74245 - 75351 (-)
Gene ID: HRGMv2_0720_1_71
Type: TC
Location: 75424 - 76548 (-)
Gene ID: HRGMv2_0720_1_72
Type: TF
Location: 76915 - 77871 (-)
Gene ID: HRGMv2_0720_1_73
Type: CAZyme
Location: 78173 - 79345 (+)
Gene ID: HRGMv2_0720_1_74
Type: CAZyme
Location: 79348 - 80550 (+)
Gene ID: HRGMv2_0720_1_75
Type: TC
Location: 80974 - 82692 (+)
Gene ID: HRGMv2_0720_1_76
Type: TC
Location: 82689 - 84470 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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