Cluster: HRGMv2_0719_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0719
- CGC Family ID: CGCFAM_01340
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0719_7 | HRGMv2_0719_7_14 | 16531 | 18996 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_0719_7 | HRGMv2_0719_7_15 | 19067 | 19627 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0719_7 | HRGMv2_0719_7_16 | 19653 | 20288 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0719_7 | HRGMv2_0719_7_17 | 20281 | 22479 | - | GH78 |
| pfam | HRGMv2_0719_7 | HRGMv2_0719_7_18 | 22548 | 23711 | - | FAD_binding_2 | GIDA | DAO | FAD_oxidored | FAD_oxidored | NAD_binding_8 |
| pfam | HRGMv2_0719_7 | HRGMv2_0719_7_19 | 23942 | 25933 | - | Big_2 |
| CAZyme | HRGMv2_0719_7 | HRGMv2_0719_7_20 | 25930 | 27918 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_0719_7 | HRGMv2_0719_7_21 | 27922 | 31047 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0719_7 | HRGMv2_0719_7_22 | 31101 | 31979 | - | 3.A.1.1.24 |
| pfam | HRGMv2_0719_7 | HRGMv2_0719_7_23 | 31982 | 32908 | - | BPD_transp_1 |
| NULL(UNKNOWN) | HRGMv2_0719_7 | HRGMv2_0719_7_24 | 32936 | 34615 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0719_7 | HRGMv2_0719_7_25 | 34629 | 37016 | - | CBM67 | GH78 |
Gene ID: HRGMv2_0719_7_14
Type: CAZyme
Location: 16531 - 18996 (-)
Type: CAZyme
Location: 16531 - 18996 (-)
Gene ID: HRGMv2_0719_7_15
Type:
Location: 19067 - 19627 (-)
Type:
Location: 19067 - 19627 (-)
Gene ID: HRGMv2_0719_7_16
Type:
Location: 19653 - 20288 (-)
Type:
Location: 19653 - 20288 (-)
Gene ID: HRGMv2_0719_7_17
Type: CAZyme
Location: 20281 - 22479 (-)
Type: CAZyme
Location: 20281 - 22479 (-)
Gene ID: HRGMv2_0719_7_18
Type: pfam
Location: 22548 - 23711 (-)
Type: pfam
Location: 22548 - 23711 (-)
Gene ID: HRGMv2_0719_7_19
Type: pfam
Location: 23942 - 25933 (-)
Type: pfam
Location: 23942 - 25933 (-)
Gene ID: HRGMv2_0719_7_20
Type: CAZyme
Location: 25930 - 27918 (-)
Type: CAZyme
Location: 25930 - 27918 (-)
Gene ID: HRGMv2_0719_7_21
Type:
Location: 27922 - 31047 (-)
Type:
Location: 27922 - 31047 (-)
Gene ID: HRGMv2_0719_7_22
Type: TC
Location: 31101 - 31979 (-)
Type: TC
Location: 31101 - 31979 (-)
Gene ID: HRGMv2_0719_7_23
Type: pfam
Location: 31982 - 32908 (-)
Type: pfam
Location: 31982 - 32908 (-)
Gene ID: HRGMv2_0719_7_24
Type:
Location: 32936 - 34615 (-)
Type:
Location: 32936 - 34615 (-)
Gene ID: HRGMv2_0719_7_25
Type: CAZyme
Location: 34629 - 37016 (-)
Type: CAZyme
Location: 34629 - 37016 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0719_7_18 | vegetarian > vegan | 1.02687 | 0.00565 |