Cluster: HRGMv2_0719_CGC30
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0719
- CGC Family ID: CGCFAM_00750
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0719_43 | HRGMv2_0719_43_5 | 12316 | 14208 | - | GH43 |
| TC | HRGMv2_0719_43 | HRGMv2_0719_43_6 | 14259 | 15152 | - | 3.A.1.1.11 |
| TC | HRGMv2_0719_43 | HRGMv2_0719_43_7 | 15169 | 16131 | - | 3.A.1.1.14 |
Gene ID: HRGMv2_0719_43_5
Type: CAZyme
Location: 12316 - 14208 (-)
Type: CAZyme
Location: 12316 - 14208 (-)
Gene ID: HRGMv2_0719_43_6
Type: TC
Location: 14259 - 15152 (-)
Type: TC
Location: 14259 - 15152 (-)
Gene ID: HRGMv2_0719_43_7
Type: TC
Location: 15169 - 16131 (-)
Type: TC
Location: 15169 - 16131 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0719_43_5 | vegetarian > omnivore | 1.40492 | 0.02785 |
| HRGMv2_0719_43_5 | vegetarian > vegan | 1.51365 | 0.00565 |
| HRGMv2_0719_43_7 | vegetarian > omnivore | 1.95042 | 0.02785 |
| HRGMv2_0719_43_7 | vegetarian > vegan | 1.56812 | 0.00565 |