Cluster: HRGMv2_0719_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0719
- CGC Family ID: CGCFAM_00037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0719_40 | HRGMv2_0719_40_4 | 7068 | 8765 | + | CBM34 | GH13_20 |
| TC | HRGMv2_0719_40 | HRGMv2_0719_40_5 | 8762 | 10189 | + | 3.A.1.1.26 |
| TC | HRGMv2_0719_40 | HRGMv2_0719_40_6 | 10202 | 11554 | + | 3.A.1.1.27 |
| TC | HRGMv2_0719_40 | HRGMv2_0719_40_7 | 11551 | 12399 | + | 3.A.1.1.27 |
| peptidase | HRGMv2_0719_40 | HRGMv2_0719_40_8 | 12415 | 13242 | + | S09.UNW |
| CAZyme | HRGMv2_0719_40 | HRGMv2_0719_40_9 | 13235 | 14029 | + | CE1 |
Gene ID: HRGMv2_0719_40_4
Type: CAZyme
Location: 7068 - 8765 (+)
Type: CAZyme
Location: 7068 - 8765 (+)
Gene ID: HRGMv2_0719_40_5
Type: TC
Location: 8762 - 10189 (+)
Type: TC
Location: 8762 - 10189 (+)
Gene ID: HRGMv2_0719_40_6
Type: TC
Location: 10202 - 11554 (+)
Type: TC
Location: 10202 - 11554 (+)
Gene ID: HRGMv2_0719_40_7
Type: TC
Location: 11551 - 12399 (+)
Type: TC
Location: 11551 - 12399 (+)
Gene ID: HRGMv2_0719_40_8
Type: peptidase
Location: 12415 - 13242 (+)
Type: peptidase
Location: 12415 - 13242 (+)
Gene ID: HRGMv2_0719_40_9
Type: CAZyme
Location: 13235 - 14029 (+)
Type: CAZyme
Location: 13235 - 14029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.