Cluster: HRGMv2_0719_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0719
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0719_28 | HRGMv2_0719_28_21 | 23117 | 24010 | + | 3.A.1.1.20 |
| NULL(UNKNOWN) | HRGMv2_0719_28 | HRGMv2_0719_28_22 | 24029 | 26056 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0719_28 | HRGMv2_0719_28_23 | 26070 | 28403 | + | GH163 |
Gene ID: HRGMv2_0719_28_21
Type: TC
Location: 23117 - 24010 (+)
Type: TC
Location: 23117 - 24010 (+)
Gene ID: HRGMv2_0719_28_22
Type:
Location: 24029 - 26056 (+)
Type:
Location: 24029 - 26056 (+)
Gene ID: HRGMv2_0719_28_23
Type: CAZyme
Location: 26070 - 28403 (+)
Type: CAZyme
Location: 26070 - 28403 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0719_28_21 | vegetarian > omnivore | 1.53288 | 0.02785 |
| HRGMv2_0719_28_21 | vegetarian > vegan | 1.30802 | 0.00565 |
| HRGMv2_0719_28_23 | vegetarian > omnivore | 2.15094 | 0.02785 |
| HRGMv2_0719_28_23 | vegetarian > vegan | 1.12462 | 0.00565 |