Cluster: HRGMv2_0719_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0719
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0719_28 | HRGMv2_0719_28_15 | 14190 | 15842 | + | 2.A.66.1.40 |
| pfam | HRGMv2_0719_28 | HRGMv2_0719_28_16 | 16211 | 16624 | + | HSP20 |
| CAZyme | HRGMv2_0719_28 | HRGMv2_0719_28_17 | 17090 | 19312 | + | GH78 |
Gene ID: HRGMv2_0719_28_15
Type: TC
Location: 14190 - 15842 (+)
Type: TC
Location: 14190 - 15842 (+)
Gene ID: HRGMv2_0719_28_16
Type: pfam
Location: 16211 - 16624 (+)
Type: pfam
Location: 16211 - 16624 (+)
Gene ID: HRGMv2_0719_28_17
Type: CAZyme
Location: 17090 - 19312 (+)
Type: CAZyme
Location: 17090 - 19312 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0719_28_16 | vegetarian > omnivore | 2.58000 | 0.02785 |
| HRGMv2_0719_28_16 | vegetarian > vegan | 1.38350 | 0.00565 |