Cluster: HRGMv2_0719_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0719
- CGC Family ID: CGCFAM_04489
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0719_28 | HRGMv2_0719_28_1 | 989 | 1975 | + | 2.A.119.2.1 |
| NULL(UNKNOWN) | HRGMv2_0719_28 | HRGMv2_0719_28_2 | 2240 | 2956 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0719_28 | HRGMv2_0719_28_3 | 3051 | 4334 | + | DegT_DnrJ_EryC1 |
| TC | HRGMv2_0719_28 | HRGMv2_0719_28_4 | 4331 | 5095 | + | 9.B.18.1.1 |
| pfam | HRGMv2_0719_28 | HRGMv2_0719_28_5 | 5092 | 6060 | + | ATP-grasp_3 | Dala_Dala_lig_C | ATPgrasp_Ter | PylC-like_N |
| CAZyme | HRGMv2_0719_28 | HRGMv2_0719_28_6 | 6084 | 7178 | + | GT4 |
| CAZyme | HRGMv2_0719_28 | HRGMv2_0719_28_7 | 7181 | 8095 | + | GT2 |
Gene ID: HRGMv2_0719_28_1
Type: TC
Location: 989 - 1975 (+)
Type: TC
Location: 989 - 1975 (+)
Gene ID: HRGMv2_0719_28_2
Type:
Location: 2240 - 2956 (+)
Type:
Location: 2240 - 2956 (+)
Gene ID: HRGMv2_0719_28_3
Type: pfam
Location: 3051 - 4334 (+)
Type: pfam
Location: 3051 - 4334 (+)
Gene ID: HRGMv2_0719_28_4
Type: TC
Location: 4331 - 5095 (+)
Type: TC
Location: 4331 - 5095 (+)
Gene ID: HRGMv2_0719_28_5
Type: pfam
Location: 5092 - 6060 (+)
Type: pfam
Location: 5092 - 6060 (+)
Gene ID: HRGMv2_0719_28_6
Type: CAZyme
Location: 6084 - 7178 (+)
Type: CAZyme
Location: 6084 - 7178 (+)
Gene ID: HRGMv2_0719_28_7
Type: CAZyme
Location: 7181 - 8095 (+)
Type: CAZyme
Location: 7181 - 8095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.