Cluster: HRGMv2_0719_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0719
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0719_1 | HRGMv2_0719_1_68 | 64798 | 65913 | - | 2.A.115.1.1 |
| pfam | HRGMv2_0719_1 | HRGMv2_0719_1_69 | 66449 | 69547 | - | SNF2-rel_dom | Helicase_C | SWIM | SNF2_assoc |
| TC | HRGMv2_0719_1 | HRGMv2_0719_1_70 | 69901 | 71589 | + | 1.A.26.1.2 |
| pfam | HRGMv2_0719_1 | HRGMv2_0719_1_71 | 71943 | 72404 | - | SpoU_methylase |
| CAZyme | HRGMv2_0719_1 | HRGMv2_0719_1_72 | 72411 | 74279 | - | GH20 |
Gene ID: HRGMv2_0719_1_68
Type: TC
Location: 64798 - 65913 (-)
Type: TC
Location: 64798 - 65913 (-)
Gene ID: HRGMv2_0719_1_69
Type: pfam
Location: 66449 - 69547 (-)
Type: pfam
Location: 66449 - 69547 (-)
Gene ID: HRGMv2_0719_1_70
Type: TC
Location: 69901 - 71589 (+)
Type: TC
Location: 69901 - 71589 (+)
Gene ID: HRGMv2_0719_1_71
Type: pfam
Location: 71943 - 72404 (-)
Type: pfam
Location: 71943 - 72404 (-)
Gene ID: HRGMv2_0719_1_72
Type: CAZyme
Location: 72411 - 74279 (-)
Type: CAZyme
Location: 72411 - 74279 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0719_1_68 | vegetarian > omnivore | 2.56190 | 0.02785 |
| HRGMv2_0719_1_68 | vegetarian > vegan | 1.44788 | 0.00565 |
| HRGMv2_0719_1_70 | vegetarian > vegan | 1.39691 | 0.00565 |
| HRGMv2_0719_1_71 | vegetarian > omnivore | 2.00906 | 0.02785 |
| HRGMv2_0719_1_71 | vegetarian > vegan | 3.18447 | 0.00565 |
| HRGMv2_0719_1_72 | vegetarian > omnivore | 2.13155 | 0.02785 |
| HRGMv2_0719_1_72 | vegetarian > vegan | 1.12062 | 0.00565 |