Cluster: HRGMv2_0719_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0719
- CGC Family ID: CGCFAM_05957
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0719_14 | HRGMv2_0719_14_10 | 8867 | 12103 | + | 3.A.1.122.14 |
| CAZyme | HRGMv2_0719_14 | HRGMv2_0719_14_11 | 12442 | 14583 | - | GH36 |
| TC | HRGMv2_0719_14 | HRGMv2_0719_14_12 | 14855 | 17674 | - | 3.A.1.122.2 |
Gene ID: HRGMv2_0719_14_10
Type: TC
Location: 8867 - 12103 (+)
Type: TC
Location: 8867 - 12103 (+)
Gene ID: HRGMv2_0719_14_11
Type: CAZyme
Location: 12442 - 14583 (-)
Type: CAZyme
Location: 12442 - 14583 (-)
Gene ID: HRGMv2_0719_14_12
Type: TC
Location: 14855 - 17674 (-)
Type: TC
Location: 14855 - 17674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0719_14_11 | vegan > omnivore | 1.91083 | 0.02258 |
| HRGMv2_0719_14_11 | vegetarian > omnivore | 2.01035 | 0.02785 |