Cluster: HRGMv2_0719_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0719
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0719_13 | HRGMv2_0719_13_11 | 16990 | 18036 | - | 3.A.1.130.1 |
| TC | HRGMv2_0719_13 | HRGMv2_0719_13_12 | 18033 | 18968 | - | 3.A.1.105.13 |
| pfam | HRGMv2_0719_13 | HRGMv2_0719_13_13 | 19127 | 20020 | + | GHMP_kinases_N | GHMP_kinases_C |
| STP | HRGMv2_0719_13 | HRGMv2_0719_13_14 | 20529 | 21761 | - | TPR_2 |
| TC | HRGMv2_0719_13 | HRGMv2_0719_13_15 | 21816 | 22970 | - | 2.A.45.2.6 |
| CAZyme | HRGMv2_0719_13 | HRGMv2_0719_13_16 | 23012 | 25153 | - | GH3 |
Gene ID: HRGMv2_0719_13_11
Type: TC
Location: 16990 - 18036 (-)
Type: TC
Location: 16990 - 18036 (-)
Gene ID: HRGMv2_0719_13_12
Type: TC
Location: 18033 - 18968 (-)
Type: TC
Location: 18033 - 18968 (-)
Gene ID: HRGMv2_0719_13_13
Type: pfam
Location: 19127 - 20020 (+)
Type: pfam
Location: 19127 - 20020 (+)
Gene ID: HRGMv2_0719_13_14
Type: STP
Location: 20529 - 21761 (-)
Type: STP
Location: 20529 - 21761 (-)
Gene ID: HRGMv2_0719_13_15
Type: TC
Location: 21816 - 22970 (-)
Type: TC
Location: 21816 - 22970 (-)
Gene ID: HRGMv2_0719_13_16
Type: CAZyme
Location: 23012 - 25153 (-)
Type: CAZyme
Location: 23012 - 25153 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0719_13_15 | vegetarian > omnivore | 2.09144 | 0.02785 |
| HRGMv2_0719_13_15 | vegetarian > vegan | 1.42458 | 0.00565 |
| HRGMv2_0719_13_16 | vegetarian > omnivore | 1.78518 | 0.02785 |