Cluster: HRGMv2_0719_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0719
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0719_9 | HRGMv2_0719_9_8 | 9259 | 10218 | + | GH43_26 |
| pfam | HRGMv2_0719_9 | HRGMv2_0719_9_9 | 10285 | 10704 | + | MGS |
| TC | HRGMv2_0719_9 | HRGMv2_0719_9_10 | 11215 | 13083 | - | 3.A.1.135.9 |
| TC | HRGMv2_0719_9 | HRGMv2_0719_9_11 | 13080 | 14810 | - | 3.A.1.135.9 |
Gene ID: HRGMv2_0719_9_8
Type: CAZyme
Location: 9259 - 10218 (+)
Type: CAZyme
Location: 9259 - 10218 (+)
Gene ID: HRGMv2_0719_9_9
Type: pfam
Location: 10285 - 10704 (+)
Type: pfam
Location: 10285 - 10704 (+)
Gene ID: HRGMv2_0719_9_10
Type: TC
Location: 11215 - 13083 (-)
Type: TC
Location: 11215 - 13083 (-)
Gene ID: HRGMv2_0719_9_11
Type: TC
Location: 13080 - 14810 (-)
Type: TC
Location: 13080 - 14810 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900762945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0719_9_8 | vegetarian > omnivore | 1.07697 | 0.02785 |
| HRGMv2_0719_9_8 | vegetarian > vegan | 1.49357 | 0.00565 |
| HRGMv2_0719_9_9 | vegetarian > vegan | 1.49123 | 0.00565 |