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Cluster: HRGMv2_0716_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0716_9 HRGMv2_0716_9_10 10689 11684 + GH25
TC HRGMv2_0716_9 HRGMv2_0716_9_11 12029 13078 - 3.A.1.2.15
TC HRGMv2_0716_9 HRGMv2_0716_9_12 13098 14603 - 3.A.1.2.20
TC HRGMv2_0716_9 HRGMv2_0716_9_13 14762 15703 - 3.A.1.2.11
CAZyme HRGMv2_0716_9 HRGMv2_0716_9_14 15887 17128 - GH109
TC HRGMv2_0716_9 HRGMv2_0716_9_15 17307 18221 + 3.A.1.1.11
TC HRGMv2_0716_9 HRGMv2_0716_9_16 18236 19093 + 3.A.1.1.34
TC HRGMv2_0716_9 HRGMv2_0716_9_17 19141 20358 + 3.A.1.1.41
Gene ID: HRGMv2_0716_9_10
Type: CAZyme
Location: 10689 - 11684 (+)
Gene ID: HRGMv2_0716_9_11
Type: TC
Location: 12029 - 13078 (-)
Gene ID: HRGMv2_0716_9_12
Type: TC
Location: 13098 - 14603 (-)
Gene ID: HRGMv2_0716_9_13
Type: TC
Location: 14762 - 15703 (-)
Gene ID: HRGMv2_0716_9_14
Type: CAZyme
Location: 15887 - 17128 (-)
Gene ID: HRGMv2_0716_9_15
Type: TC
Location: 17307 - 18221 (+)
Gene ID: HRGMv2_0716_9_16
Type: TC
Location: 18236 - 19093 (+)
Gene ID: HRGMv2_0716_9_17
Type: TC
Location: 19141 - 20358 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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