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Cluster: HRGMv2_0716_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0716_40 HRGMv2_0716_40_13 11178 12245 + GH172
STP HRGMv2_0716_40 HRGMv2_0716_40_14 12460 13437 - PfkB
TC HRGMv2_0716_40 HRGMv2_0716_40_15 13444 14361 - 9.B.149.1.1
STP HRGMv2_0716_40 HRGMv2_0716_40_16 14387 15112 - Peptidase_M23
TC HRGMv2_0716_40 HRGMv2_0716_40_17 15172 16416 - 2.A.103.1.2
peptidase HRGMv2_0716_40 HRGMv2_0716_40_18 16471 18963 - X52.001
pfam HRGMv2_0716_40 HRGMv2_0716_40_19 18960 19502 - ECF-ribofla_trS
TC HRGMv2_0716_40 HRGMv2_0716_40_20 19640 20776 - 9.B.157.1.1
TC HRGMv2_0716_40 HRGMv2_0716_40_21 20810 21850 - 9.B.157.1.2
Gene ID: HRGMv2_0716_40_13
Type: CAZyme
Location: 11178 - 12245 (+)
Gene ID: HRGMv2_0716_40_14
Type: STP
Location: 12460 - 13437 (-)
Gene ID: HRGMv2_0716_40_15
Type: TC
Location: 13444 - 14361 (-)
Gene ID: HRGMv2_0716_40_16
Type: STP
Location: 14387 - 15112 (-)
Gene ID: HRGMv2_0716_40_17
Type: TC
Location: 15172 - 16416 (-)
Gene ID: HRGMv2_0716_40_18
Type: peptidase
Location: 16471 - 18963 (-)
Gene ID: HRGMv2_0716_40_19
Type: pfam
Location: 18960 - 19502 (-)
Gene ID: HRGMv2_0716_40_20
Type: TC
Location: 19640 - 20776 (-)
Gene ID: HRGMv2_0716_40_21
Type: TC
Location: 20810 - 21850 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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