Cluster: HRGMv2_0716_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0716
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0716_38 | HRGMv2_0716_38_17 | 16437 | 17720 | + | GH109 |
| NULL(UNKNOWN) | HRGMv2_0716_38 | HRGMv2_0716_38_18 | 17728 | 17826 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0716_38 | HRGMv2_0716_38_19 | 18513 | 19694 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | HRGMv2_0716_38 | HRGMv2_0716_38_20 | 20301 | 21212 | + | 3.A.1.15.3 |
| TF | HRGMv2_0716_38 | HRGMv2_0716_38_21 | 21209 | 21676 | + | FUR |
| TC | HRGMv2_0716_38 | HRGMv2_0716_38_22 | 21636 | 22328 | + | 3.A.1.15.11 |
| TC | HRGMv2_0716_38 | HRGMv2_0716_38_23 | 22328 | 23356 | + | 3.A.1.15.10 |
Gene ID: HRGMv2_0716_38_17
Type: CAZyme
Location: 16437 - 17720 (+)
Type: CAZyme
Location: 16437 - 17720 (+)
Gene ID: HRGMv2_0716_38_18
Type:
Location: 17728 - 17826 (+)
Type:
Location: 17728 - 17826 (+)
Gene ID: HRGMv2_0716_38_19
Type: pfam
Location: 18513 - 19694 (+)
Type: pfam
Location: 18513 - 19694 (+)
Gene ID: HRGMv2_0716_38_20
Type: TC
Location: 20301 - 21212 (+)
Type: TC
Location: 20301 - 21212 (+)
Gene ID: HRGMv2_0716_38_21
Type: TF
Location: 21209 - 21676 (+)
Type: TF
Location: 21209 - 21676 (+)
Gene ID: HRGMv2_0716_38_22
Type: TC
Location: 21636 - 22328 (+)
Type: TC
Location: 21636 - 22328 (+)
Gene ID: HRGMv2_0716_38_23
Type: TC
Location: 22328 - 23356 (+)
Type: TC
Location: 22328 - 23356 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Species
Faecivicinus avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.