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Cluster: HRGMv2_0716_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0716_37 HRGMv2_0716_37_4 2260 3645 - 2.A.66.1.33
TC HRGMv2_0716_37 HRGMv2_0716_37_5 3900 4748 + 3.A.1.3.10
TC HRGMv2_0716_37 HRGMv2_0716_37_6 4873 5520 + 3.A.1.3.10
TC HRGMv2_0716_37 HRGMv2_0716_37_7 5536 6291 + 3.A.1.3.10
NULL(UNKNOWN) HRGMv2_0716_37 HRGMv2_0716_37_8 6550 7359 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0716_37 HRGMv2_0716_37_9 7757 8296 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0716_37 HRGMv2_0716_37_10 8703 10211 - GH51_1
pfam HRGMv2_0716_37 HRGMv2_0716_37_11 10810 12198 - LytR_cpsA_psr
TC HRGMv2_0716_37 HRGMv2_0716_37_12 12324 14090 - 3.A.1.135.5
TC HRGMv2_0716_37 HRGMv2_0716_37_13 14077 15813 - 3.A.1.135.7
Gene ID: HRGMv2_0716_37_4
Type: TC
Location: 2260 - 3645 (-)
Gene ID: HRGMv2_0716_37_5
Type: TC
Location: 3900 - 4748 (+)
Gene ID: HRGMv2_0716_37_6
Type: TC
Location: 4873 - 5520 (+)
Gene ID: HRGMv2_0716_37_7
Type: TC
Location: 5536 - 6291 (+)
Gene ID: HRGMv2_0716_37_8
Type:
Location: 6550 - 7359 (+)
Gene ID: HRGMv2_0716_37_9
Type:
Location: 7757 - 8296 (-)
Gene ID: HRGMv2_0716_37_10
Type: CAZyme
Location: 8703 - 10211 (-)
Gene ID: HRGMv2_0716_37_11
Type: pfam
Location: 10810 - 12198 (-)
Gene ID: HRGMv2_0716_37_12
Type: TC
Location: 12324 - 14090 (-)
Gene ID: HRGMv2_0716_37_13
Type: TC
Location: 14077 - 15813 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0716_37_6 vegetarian > omnivore 1.39470 0.01560
HRGMv2_0716_37_6 vegetarian > vegan 1.27709 0.00855

🧭 Explore Read Mapping of CGC

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