Cluster: HRGMv2_0716_CGC3
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0716
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0716_3 | HRGMv2_0716_3_45 | 55053 | 55754 | + | 9.B.120.1.3 |
| pfam | HRGMv2_0716_3 | HRGMv2_0716_3_46 | 55797 | 57068 | + | MFS_1 | MFS_1 | MFS_1_like |
| CAZyme | HRGMv2_0716_3 | HRGMv2_0716_3_47 | 57237 | 58223 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_0716_3 | HRGMv2_0716_3_48 | 58559 | 59251 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0716_3 | HRGMv2_0716_3_49 | 59560 | 60393 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_0716_3 | HRGMv2_0716_3_50 | 60387 | 61778 | - | GH32 |
| pfam | HRGMv2_0716_3 | HRGMv2_0716_3_51 | 61831 | 62463 | - | G3P_acyltransf |
| CAZyme | HRGMv2_0716_3 | HRGMv2_0716_3_52 | 62445 | 63566 | - | GT28 |
| pfam | HRGMv2_0716_3 | HRGMv2_0716_3_53 | 63680 | 65032 | - | MatE | MatE | MurJ |
| CAZyme | HRGMv2_0716_3 | HRGMv2_0716_3_54 | 65258 | 66430 | + | GH179 |
| TC | HRGMv2_0716_3 | HRGMv2_0716_3_55 | 67205 | 68251 | - | 4.D.2.1.5 |
| pfam | HRGMv2_0716_3 | HRGMv2_0716_3_56 | 68321 | 68632 | - | Thioredoxin | Thioredoxin_2 | TraF | Thioredoxin_9 |
| NULL(UNKNOWN) | HRGMv2_0716_3 | HRGMv2_0716_3_57 | 68832 | 69563 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0716_3 | HRGMv2_0716_3_58 | 69551 | 70294 | + | GH25 |
Gene ID: HRGMv2_0716_3_45
Type: TC
Location: 55053 - 55754 (+)
Type: TC
Location: 55053 - 55754 (+)
Gene ID: HRGMv2_0716_3_46
Type: pfam
Location: 55797 - 57068 (+)
Type: pfam
Location: 55797 - 57068 (+)
Gene ID: HRGMv2_0716_3_47
Type: CAZyme
Location: 57237 - 58223 (-)
Type: CAZyme
Location: 57237 - 58223 (-)
Gene ID: HRGMv2_0716_3_48
Type:
Location: 58559 - 59251 (+)
Type:
Location: 58559 - 59251 (+)
Gene ID: HRGMv2_0716_3_49
Type: pfam
Location: 59560 - 60393 (-)
Type: pfam
Location: 59560 - 60393 (-)
Gene ID: HRGMv2_0716_3_50
Type: CAZyme
Location: 60387 - 61778 (-)
Type: CAZyme
Location: 60387 - 61778 (-)
Gene ID: HRGMv2_0716_3_51
Type: pfam
Location: 61831 - 62463 (-)
Type: pfam
Location: 61831 - 62463 (-)
Gene ID: HRGMv2_0716_3_52
Type: CAZyme
Location: 62445 - 63566 (-)
Type: CAZyme
Location: 62445 - 63566 (-)
Gene ID: HRGMv2_0716_3_53
Type: pfam
Location: 63680 - 65032 (-)
Type: pfam
Location: 63680 - 65032 (-)
Gene ID: HRGMv2_0716_3_54
Type: CAZyme
Location: 65258 - 66430 (+)
Type: CAZyme
Location: 65258 - 66430 (+)
Gene ID: HRGMv2_0716_3_55
Type: TC
Location: 67205 - 68251 (-)
Type: TC
Location: 67205 - 68251 (-)
Gene ID: HRGMv2_0716_3_56
Type: pfam
Location: 68321 - 68632 (-)
Type: pfam
Location: 68321 - 68632 (-)
Gene ID: HRGMv2_0716_3_57
Type:
Location: 68832 - 69563 (+)
Type:
Location: 68832 - 69563 (+)
Gene ID: HRGMv2_0716_3_58
Type: CAZyme
Location: 69551 - 70294 (+)
Type: CAZyme
Location: 69551 - 70294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Species
Faecivicinus avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.