Cluster: HRGMv2_0716_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0716
- CGC Family ID: CGCFAM_00133
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0716_18 | HRGMv2_0716_18_24 | 28582 | 30222 | + | GH123 |
| TF | HRGMv2_0716_18 | HRGMv2_0716_18_25 | 30338 | 31090 | - | HTH_AraC |
| TC | HRGMv2_0716_18 | HRGMv2_0716_18_26 | 31065 | 32816 | - | 8.A.59.2.1 |
| STP | HRGMv2_0716_18 | HRGMv2_0716_18_27 | 32890 | 34425 | - | SBP_bac_1 |
| TC | HRGMv2_0716_18 | HRGMv2_0716_18_28 | 34488 | 35363 | - | 3.A.1.1.29 |
| TC | HRGMv2_0716_18 | HRGMv2_0716_18_29 | 35363 | 36298 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_0716_18_24
Type: CAZyme
Location: 28582 - 30222 (+)
Type: CAZyme
Location: 28582 - 30222 (+)
Gene ID: HRGMv2_0716_18_25
Type: TF
Location: 30338 - 31090 (-)
Type: TF
Location: 30338 - 31090 (-)
Gene ID: HRGMv2_0716_18_26
Type: TC
Location: 31065 - 32816 (-)
Type: TC
Location: 31065 - 32816 (-)
Gene ID: HRGMv2_0716_18_27
Type: STP
Location: 32890 - 34425 (-)
Type: STP
Location: 32890 - 34425 (-)
Gene ID: HRGMv2_0716_18_28
Type: TC
Location: 34488 - 35363 (-)
Type: TC
Location: 34488 - 35363 (-)
Gene ID: HRGMv2_0716_18_29
Type: TC
Location: 35363 - 36298 (-)
Type: TC
Location: 35363 - 36298 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Species
Faecivicinus avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.