Cluster: HRGMv2_0716_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0716
- CGC Family ID: CGCFAM_00573
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0716_17 | HRGMv2_0716_17_25 | 28956 | 29849 | - | GT8 |
| pfam | HRGMv2_0716_17 | HRGMv2_0716_17_26 | 29925 | 30467 | - | DUF308 | DUF308 | DUF308 |
| TC | HRGMv2_0716_17 | HRGMv2_0716_17_27 | 30464 | 31423 | - | 3.A.16.1.1 |
| TC | HRGMv2_0716_17 | HRGMv2_0716_17_28 | 31436 | 32302 | - | 3.A.16.1.2 |
| pfam | HRGMv2_0716_17 | HRGMv2_0716_17_29 | 32376 | 32978 | - | Cytidylate_kin2 |
| TC | HRGMv2_0716_17 | HRGMv2_0716_17_30 | 33008 | 34795 | - | 3.A.1.135.6 |
| TC | HRGMv2_0716_17 | HRGMv2_0716_17_31 | 34837 | 36591 | - | 3.A.1.135.6 |
Gene ID: HRGMv2_0716_17_25
Type: CAZyme
Location: 28956 - 29849 (-)
Type: CAZyme
Location: 28956 - 29849 (-)
Gene ID: HRGMv2_0716_17_26
Type: pfam
Location: 29925 - 30467 (-)
Type: pfam
Location: 29925 - 30467 (-)
Gene ID: HRGMv2_0716_17_27
Type: TC
Location: 30464 - 31423 (-)
Type: TC
Location: 30464 - 31423 (-)
Gene ID: HRGMv2_0716_17_28
Type: TC
Location: 31436 - 32302 (-)
Type: TC
Location: 31436 - 32302 (-)
Gene ID: HRGMv2_0716_17_29
Type: pfam
Location: 32376 - 32978 (-)
Type: pfam
Location: 32376 - 32978 (-)
Gene ID: HRGMv2_0716_17_30
Type: TC
Location: 33008 - 34795 (-)
Type: TC
Location: 33008 - 34795 (-)
Gene ID: HRGMv2_0716_17_31
Type: TC
Location: 34837 - 36591 (-)
Type: TC
Location: 34837 - 36591 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Species
Faecivicinus avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.