Cluster: HRGMv2_0716_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0716
- CGC Family ID: CGCFAM_00142
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0716_10 | HRGMv2_0716_10_35 | 50300 | 51256 | - | GH179 |
| pfam | HRGMv2_0716_10 | HRGMv2_0716_10_36 | 51270 | 52094 | - | AP_endonuc_2 |
| TC | HRGMv2_0716_10 | HRGMv2_0716_10_37 | 52201 | 53793 | - | 3.A.1.1.29 |
| TC | HRGMv2_0716_10 | HRGMv2_0716_10_38 | 53866 | 54771 | - | 3.A.1.1.10 |
| TC | HRGMv2_0716_10 | HRGMv2_0716_10_39 | 54784 | 55761 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_0716_10_35
Type: CAZyme
Location: 50300 - 51256 (-)
Type: CAZyme
Location: 50300 - 51256 (-)
Gene ID: HRGMv2_0716_10_36
Type: pfam
Location: 51270 - 52094 (-)
Type: pfam
Location: 51270 - 52094 (-)
Gene ID: HRGMv2_0716_10_37
Type: TC
Location: 52201 - 53793 (-)
Type: TC
Location: 52201 - 53793 (-)
Gene ID: HRGMv2_0716_10_38
Type: TC
Location: 53866 - 54771 (-)
Type: TC
Location: 53866 - 54771 (-)
Gene ID: HRGMv2_0716_10_39
Type: TC
Location: 54784 - 55761 (-)
Type: TC
Location: 54784 - 55761 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Species
Faecivicinus avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.