Cluster: HRGMv2_0716_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0716
- CGC Family ID: CGCFAM_01626
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0716_10 | HRGMv2_0716_10_8 | 10523 | 11626 | - | GH5_13 |
| TC | HRGMv2_0716_10 | HRGMv2_0716_10_9 | 11659 | 12579 | - | 3.A.1.1.9 |
| TC | HRGMv2_0716_10 | HRGMv2_0716_10_10 | 12596 | 13537 | - | 3.A.1.1.9 |
| TC | HRGMv2_0716_10 | HRGMv2_0716_10_11 | 13601 | 15283 | - | 3.A.1.1.9 |
| TF | HRGMv2_0716_10 | HRGMv2_0716_10_12 | 15409 | 16998 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_0716_10 | HRGMv2_0716_10_13 | 16970 | 18745 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_0716_10_8
Type: CAZyme
Location: 10523 - 11626 (-)
Type: CAZyme
Location: 10523 - 11626 (-)
Gene ID: HRGMv2_0716_10_9
Type: TC
Location: 11659 - 12579 (-)
Type: TC
Location: 11659 - 12579 (-)
Gene ID: HRGMv2_0716_10_10
Type: TC
Location: 12596 - 13537 (-)
Type: TC
Location: 12596 - 13537 (-)
Gene ID: HRGMv2_0716_10_11
Type: TC
Location: 13601 - 15283 (-)
Type: TC
Location: 13601 - 15283 (-)
Gene ID: HRGMv2_0716_10_12
Type: TF
Location: 15409 - 16998 (-)
Type: TF
Location: 15409 - 16998 (-)
Gene ID: HRGMv2_0716_10_13
Type: TC
Location: 16970 - 18745 (-)
Type: TC
Location: 16970 - 18745 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Species
Faecivicinus avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.