Cluster: HRGMv2_0713_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0713
- CGC Family ID: CGCFAM_00762
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0713_3 | HRGMv2_0713_3_12 | 10337 | 11014 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_0713_3 | HRGMv2_0713_3_13 | 10984 | 11253 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0713_3 | HRGMv2_0713_3_14 | 11282 | 11398 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0713_3 | HRGMv2_0713_3_15 | 11434 | 12087 | + | 3.A.1.1.9 |
| STP | HRGMv2_0713_3 | HRGMv2_0713_3_16 | 12106 | 13818 | + | SBP_bac_1 |
| CAZyme | HRGMv2_0713_3 | HRGMv2_0713_3_17 | 13822 | 15348 | + | GH173 |
Gene ID: HRGMv2_0713_3_12
Type: TC
Location: 10337 - 11014 (+)
Type: TC
Location: 10337 - 11014 (+)
Gene ID: HRGMv2_0713_3_13
Type:
Location: 10984 - 11253 (+)
Type:
Location: 10984 - 11253 (+)
Gene ID: HRGMv2_0713_3_14
Type:
Location: 11282 - 11398 (-)
Type:
Location: 11282 - 11398 (-)
Gene ID: HRGMv2_0713_3_15
Type: TC
Location: 11434 - 12087 (+)
Type: TC
Location: 11434 - 12087 (+)
Gene ID: HRGMv2_0713_3_16
Type: STP
Location: 12106 - 13818 (+)
Type: STP
Location: 12106 - 13818 (+)
Gene ID: HRGMv2_0713_3_17
Type: CAZyme
Location: 13822 - 15348 (+)
Type: CAZyme
Location: 13822 - 15348 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia ceftriaxoniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.