Cluster: HRGMv2_0713_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0713
- CGC Family ID: CGCFAM_00098
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0713_2 | HRGMv2_0713_2_96 | 116115 | 117605 | - | GH77 |
| CAZyme | HRGMv2_0713_2 | HRGMv2_0713_2_97 | 117595 | 119853 | - | GT35 |
| TC | HRGMv2_0713_2 | HRGMv2_0713_2_98 | 119855 | 120697 | - | 3.A.1.1.27 |
| TC | HRGMv2_0713_2 | HRGMv2_0713_2_99 | 120694 | 122040 | - | 3.A.1.1.27 |
| STP | HRGMv2_0713_2 | HRGMv2_0713_2_100 | 122054 | 123508 | - | SBP_bac_1 |
| CAZyme | HRGMv2_0713_2 | HRGMv2_0713_2_101 | 123747 | 125417 | - | CBM34 | GH13_20 |
Gene ID: HRGMv2_0713_2_96
Type: CAZyme
Location: 116115 - 117605 (-)
Type: CAZyme
Location: 116115 - 117605 (-)
Gene ID: HRGMv2_0713_2_97
Type: CAZyme
Location: 117595 - 119853 (-)
Type: CAZyme
Location: 117595 - 119853 (-)
Gene ID: HRGMv2_0713_2_98
Type: TC
Location: 119855 - 120697 (-)
Type: TC
Location: 119855 - 120697 (-)
Gene ID: HRGMv2_0713_2_99
Type: TC
Location: 120694 - 122040 (-)
Type: TC
Location: 120694 - 122040 (-)
Gene ID: HRGMv2_0713_2_100
Type: STP
Location: 122054 - 123508 (-)
Type: STP
Location: 122054 - 123508 (-)
Gene ID: HRGMv2_0713_2_101
Type: CAZyme
Location: 123747 - 125417 (-)
Type: CAZyme
Location: 123747 - 125417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia ceftriaxoniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.