Cluster: HRGMv2_0713_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0713
- CGC Family ID: CGCFAM_00350
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0713_36 | HRGMv2_0713_36_5 | 4164 | 6755 | - | GH78 |
| pfam | HRGMv2_0713_36 | HRGMv2_0713_36_6 | 6816 | 10298 | - | Big_2 | Big_2 | Big-like |
| NULL(UNKNOWN) | HRGMv2_0713_36 | HRGMv2_0713_36_7 | 10355 | 12343 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0713_36 | HRGMv2_0713_36_8 | 12358 | 13218 | - | 3.A.1.1.36 |
| TC | HRGMv2_0713_36 | HRGMv2_0713_36_9 | 13208 | 14113 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_0713_36_5
Type: CAZyme
Location: 4164 - 6755 (-)
Type: CAZyme
Location: 4164 - 6755 (-)
Gene ID: HRGMv2_0713_36_6
Type: pfam
Location: 6816 - 10298 (-)
Type: pfam
Location: 6816 - 10298 (-)
Gene ID: HRGMv2_0713_36_7
Type:
Location: 10355 - 12343 (-)
Type:
Location: 10355 - 12343 (-)
Gene ID: HRGMv2_0713_36_8
Type: TC
Location: 12358 - 13218 (-)
Type: TC
Location: 12358 - 13218 (-)
Gene ID: HRGMv2_0713_36_9
Type: TC
Location: 13208 - 14113 (-)
Type: TC
Location: 13208 - 14113 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia ceftriaxoniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.