Cluster: HRGMv2_0713_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0713
- CGC Family ID: CGCFAM_00041
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0713_34 | HRGMv2_0713_34_5 | 7336 | 8259 | + | 3.A.1.1.22 |
| TC | HRGMv2_0713_34 | HRGMv2_0713_34_6 | 8264 | 9172 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | HRGMv2_0713_34 | HRGMv2_0713_34_7 | 9184 | 11484 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0713_34 | HRGMv2_0713_34_8 | 11548 | 13344 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0713_34 | HRGMv2_0713_34_9 | 13428 | 16517 | + | GH28 |
| CAZyme | HRGMv2_0713_34 | HRGMv2_0713_34_10 | 16514 | 17692 | + | CE2 |
| CAZyme | HRGMv2_0713_34 | HRGMv2_0713_34_11 | 17699 | 18829 | + | CE2 |
Gene ID: HRGMv2_0713_34_5
Type: TC
Location: 7336 - 8259 (+)
Type: TC
Location: 7336 - 8259 (+)
Gene ID: HRGMv2_0713_34_6
Type: TC
Location: 8264 - 9172 (+)
Type: TC
Location: 8264 - 9172 (+)
Gene ID: HRGMv2_0713_34_7
Type:
Location: 9184 - 11484 (+)
Type:
Location: 9184 - 11484 (+)
Gene ID: HRGMv2_0713_34_8
Type:
Location: 11548 - 13344 (+)
Type:
Location: 11548 - 13344 (+)
Gene ID: HRGMv2_0713_34_9
Type: CAZyme
Location: 13428 - 16517 (+)
Type: CAZyme
Location: 13428 - 16517 (+)
Gene ID: HRGMv2_0713_34_10
Type: CAZyme
Location: 16514 - 17692 (+)
Type: CAZyme
Location: 16514 - 17692 (+)
Gene ID: HRGMv2_0713_34_11
Type: CAZyme
Location: 17699 - 18829 (+)
Type: CAZyme
Location: 17699 - 18829 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia ceftriaxoniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.