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Cluster: HRGMv2_0713_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0713_18 HRGMv2_0713_18_25 22108 24942 + GH136
NULL(UNKNOWN) HRGMv2_0713_18 HRGMv2_0713_18_26 24947 28231 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0713_18 HRGMv2_0713_18_27 28593 29396 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0713_18 HRGMv2_0713_18_28 29393 30337 + 3.A.1.1.9
TC HRGMv2_0713_18 HRGMv2_0713_18_29 30350 31213 + 3.A.1.1.9
CAZyme HRGMv2_0713_18 HRGMv2_0713_18_30 31218 32951 + GH78
NULL(UNKNOWN) HRGMv2_0713_18 HRGMv2_0713_18_31 33013 34095 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0713_18 HRGMv2_0713_18_32 34553 35806 + Peripla_BP_2
TC HRGMv2_0713_18 HRGMv2_0713_18_33 35810 36838 + 3.A.1.14.11
TC HRGMv2_0713_18 HRGMv2_0713_18_34 36835 37980 + 3.A.1.13.2
Gene ID: HRGMv2_0713_18_25
Type: CAZyme
Location: 22108 - 24942 (+)
Gene ID: HRGMv2_0713_18_26
Type:
Location: 24947 - 28231 (+)
Gene ID: HRGMv2_0713_18_27
Type:
Location: 28593 - 29396 (+)
Gene ID: HRGMv2_0713_18_28
Type: TC
Location: 29393 - 30337 (+)
Gene ID: HRGMv2_0713_18_29
Type: TC
Location: 30350 - 31213 (+)
Gene ID: HRGMv2_0713_18_30
Type: CAZyme
Location: 31218 - 32951 (+)
Gene ID: HRGMv2_0713_18_31
Type:
Location: 33013 - 34095 (+)
Gene ID: HRGMv2_0713_18_32
Type: STP
Location: 34553 - 35806 (+)
Gene ID: HRGMv2_0713_18_33
Type: TC
Location: 35810 - 36838 (+)
Gene ID: HRGMv2_0713_18_34
Type: TC
Location: 36835 - 37980 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0713_18_30 vegetarian > vegan 1.33586 0.03641
HRGMv2_0713_18_31 vegetarian > vegan 1.18424 0.03633
HRGMv2_0713_18_34 vegetarian > omnivore 1.46516 0.01386

🧭 Explore Read Mapping of CGC

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