dbCAN Logo

Cluster: HRGMv2_0712_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0712_1 HRGMv2_0712_1_402 460416 462653 - GH65
pfam HRGMv2_0712_1 HRGMv2_0712_1_403 462647 464194 - ADP_ribosyl_GH
TC HRGMv2_0712_1 HRGMv2_0712_1_404 464206 465087 - 3.A.1.1.47
TC HRGMv2_0712_1 HRGMv2_0712_1_405 465080 465988 - 3.A.1.1.36
STP HRGMv2_0712_1 HRGMv2_0712_1_406 466042 467412 - SBP_bac_1
CAZyme HRGMv2_0712_1 HRGMv2_0712_1_407 467423 469414 - GH28
pfam HRGMv2_0712_1 HRGMv2_0712_1_408 469425 471326 - Flg_new | Flg_new | Flg_new_2
TC HRGMv2_0712_1 HRGMv2_0712_1_409 471700 473112 - 3.A.1.18.3
TC HRGMv2_0712_1 HRGMv2_0712_1_410 473109 473786 - 3.A.1.18.1
TC HRGMv2_0712_1 HRGMv2_0712_1_411 473783 474475 - 3.A.1.18.3
TC HRGMv2_0712_1 HRGMv2_0712_1_412 474476 476155 - 3.A.1.106.11
TC HRGMv2_0712_1 HRGMv2_0712_1_413 476152 477900 - 3.A.1.106.12
pfam HRGMv2_0712_1 HRGMv2_0712_1_414 477905 478246 - YgbA_NO
TC HRGMv2_0712_1 HRGMv2_0712_1_415 478542 480260 - 3.A.1.21.1
TC HRGMv2_0712_1 HRGMv2_0712_1_416 480257 482062 - 3.A.1.21.1
Gene ID: HRGMv2_0712_1_402
Type: CAZyme
Location: 460416 - 462653 (-)
Gene ID: HRGMv2_0712_1_403
Type: pfam
Location: 462647 - 464194 (-)
Gene ID: HRGMv2_0712_1_404
Type: TC
Location: 464206 - 465087 (-)
Gene ID: HRGMv2_0712_1_405
Type: TC
Location: 465080 - 465988 (-)
Gene ID: HRGMv2_0712_1_406
Type: STP
Location: 466042 - 467412 (-)
Gene ID: HRGMv2_0712_1_407
Type: CAZyme
Location: 467423 - 469414 (-)
Gene ID: HRGMv2_0712_1_408
Type: pfam
Location: 469425 - 471326 (-)
Gene ID: HRGMv2_0712_1_409
Type: TC
Location: 471700 - 473112 (-)
Gene ID: HRGMv2_0712_1_410
Type: TC
Location: 473109 - 473786 (-)
Gene ID: HRGMv2_0712_1_411
Type: TC
Location: 473783 - 474475 (-)
Gene ID: HRGMv2_0712_1_412
Type: TC
Location: 474476 - 476155 (-)
Gene ID: HRGMv2_0712_1_413
Type: TC
Location: 476152 - 477900 (-)
Gene ID: HRGMv2_0712_1_414
Type: pfam
Location: 477905 - 478246 (-)
Gene ID: HRGMv2_0712_1_415
Type: TC
Location: 478542 - 480260 (-)
Gene ID: HRGMv2_0712_1_416
Type: TC
Location: 480257 - 482062 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List