Cluster: HRGMv2_0712_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0712
- CGC Family ID: CGCFAM_00674
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0712_1 | HRGMv2_0712_1_386 | 439686 | 440531 | - | 3.A.1.1.34 |
| TC | HRGMv2_0712_1 | HRGMv2_0712_1_387 | 440528 | 442474 | - | 3.A.1.1.11 |
| pfam | HRGMv2_0712_1 | HRGMv2_0712_1_388 | 442536 | 445943 | - | Big_2 | Big_2 | Big_2 | Big_2 |
| STP | HRGMv2_0712_1 | HRGMv2_0712_1_389 | 445973 | 447577 | - | SBP_bac_1 |
| CAZyme | HRGMv2_0712_1 | HRGMv2_0712_1_390 | 447631 | 449958 | - | GH78 |
Gene ID: HRGMv2_0712_1_386
Type: TC
Location: 439686 - 440531 (-)
Type: TC
Location: 439686 - 440531 (-)
Gene ID: HRGMv2_0712_1_387
Type: TC
Location: 440528 - 442474 (-)
Type: TC
Location: 440528 - 442474 (-)
Gene ID: HRGMv2_0712_1_388
Type: pfam
Location: 442536 - 445943 (-)
Type: pfam
Location: 442536 - 445943 (-)
Gene ID: HRGMv2_0712_1_389
Type: STP
Location: 445973 - 447577 (-)
Type: STP
Location: 445973 - 447577 (-)
Gene ID: HRGMv2_0712_1_390
Type: CAZyme
Location: 447631 - 449958 (-)
Type: CAZyme
Location: 447631 - 449958 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS621
Species
UMGS621 sp900543915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.