Cluster: HRGMv2_0712_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0712
- CGC Family ID: CGCFAM_00831
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0712_23 | HRGMv2_0712_23_3 | 3009 | 3881 | - | 3.A.1.1.29 |
| TC | HRGMv2_0712_23 | HRGMv2_0712_23_4 | 3892 | 4833 | - | 3.A.1.1.10 |
| TF | HRGMv2_0712_23 | HRGMv2_0712_23_5 | 4956 | 5882 | + | HTH_AraC |
| pfam | HRGMv2_0712_23 | HRGMv2_0712_23_6 | 6051 | 6728 | + | YjbR |
| CAZyme | HRGMv2_0712_23 | HRGMv2_0712_23_7 | 6874 | 8130 | - | GH36 |
Gene ID: HRGMv2_0712_23_3
Type: TC
Location: 3009 - 3881 (-)
Type: TC
Location: 3009 - 3881 (-)
Gene ID: HRGMv2_0712_23_4
Type: TC
Location: 3892 - 4833 (-)
Type: TC
Location: 3892 - 4833 (-)
Gene ID: HRGMv2_0712_23_5
Type: TF
Location: 4956 - 5882 (+)
Type: TF
Location: 4956 - 5882 (+)
Gene ID: HRGMv2_0712_23_6
Type: pfam
Location: 6051 - 6728 (+)
Type: pfam
Location: 6051 - 6728 (+)
Gene ID: HRGMv2_0712_23_7
Type: CAZyme
Location: 6874 - 8130 (-)
Type: CAZyme
Location: 6874 - 8130 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS621
Species
UMGS621 sp900543915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.