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Cluster: HRGMv2_0712_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0712_7 HRGMv2_0712_7_39 51417 52271 + 2.A.7.2.1
CAZyme HRGMv2_0712_7 HRGMv2_0712_7_40 52369 53934 - GH13_44
pfam HRGMv2_0712_7 HRGMv2_0712_7_41 53949 55214 - Peptidase_S9 | DLH | AXE1
sulfatase HRGMv2_0712_7 HRGMv2_0712_7_42 55211 56485 - S1_19
CAZyme HRGMv2_0712_7 HRGMv2_0712_7_43 56502 58970 - CBM67 | GH78
CAZyme HRGMv2_0712_7 HRGMv2_0712_7_44 58957 61500 - GH78
Gene ID: HRGMv2_0712_7_39
Type: TC
Location: 51417 - 52271 (+)
Gene ID: HRGMv2_0712_7_40
Type: CAZyme
Location: 52369 - 53934 (-)
Gene ID: HRGMv2_0712_7_41
Type: pfam
Location: 53949 - 55214 (-)
Gene ID: HRGMv2_0712_7_42
Type: sulfatase
Location: 55211 - 56485 (-)
Gene ID: HRGMv2_0712_7_43
Type: CAZyme
Location: 56502 - 58970 (-)
Gene ID: HRGMv2_0712_7_44
Type: CAZyme
Location: 58957 - 61500 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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