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Cluster: HRGMv2_0712_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0712_6 HRGMv2_0712_6_36 52279 53724 - 9.A.11.1.2
NULL(UNKNOWN) HRGMv2_0712_6 HRGMv2_0712_6_37 53794 54318 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0712_6 HRGMv2_0712_6_38 54600 55445 + 3.A.1.3.23
TC HRGMv2_0712_6 HRGMv2_0712_6_39 55518 56219 + 3.A.1.3.15
TC HRGMv2_0712_6 HRGMv2_0712_6_40 56206 57120 + 3.A.1.3.15
CAZyme HRGMv2_0712_6 HRGMv2_0712_6_41 58062 59486 + GT2
TC HRGMv2_0712_6 HRGMv2_0712_6_42 60296 61051 + 3.A.1.3.10
TC HRGMv2_0712_6 HRGMv2_0712_6_43 61069 61716 + 3.A.1.3.12
TC HRGMv2_0712_6 HRGMv2_0712_6_44 61719 62576 + 3.A.1.3.24
Gene ID: HRGMv2_0712_6_36
Type: TC
Location: 52279 - 53724 (-)
Gene ID: HRGMv2_0712_6_37
Type:
Location: 53794 - 54318 (-)
Gene ID: HRGMv2_0712_6_38
Type: TC
Location: 54600 - 55445 (+)
Gene ID: HRGMv2_0712_6_39
Type: TC
Location: 55518 - 56219 (+)
Gene ID: HRGMv2_0712_6_40
Type: TC
Location: 56206 - 57120 (+)
Gene ID: HRGMv2_0712_6_41
Type: CAZyme
Location: 58062 - 59486 (+)
Gene ID: HRGMv2_0712_6_42
Type: TC
Location: 60296 - 61051 (+)
Gene ID: HRGMv2_0712_6_43
Type: TC
Location: 61069 - 61716 (+)
Gene ID: HRGMv2_0712_6_44
Type: TC
Location: 61719 - 62576 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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