Cluster: HRGMv2_0708_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0708
- CGC Family ID: CGCFAM_07182
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0708_4 | HRGMv2_0708_4_52 | 50799 | 51983 | - | 3.A.1.115.1 |
| TC | HRGMv2_0708_4 | HRGMv2_0708_4_53 | 51980 | 52756 | - | 3.A.1.128.6 |
| pfam | HRGMv2_0708_4 | HRGMv2_0708_4_54 | 52972 | 53706 | - | Hydrolase | Hydrolase_like | HAD_2 |
| CAZyme | HRGMv2_0708_4 | HRGMv2_0708_4_55 | 53787 | 55421 | - | GT5 |
| pfam | HRGMv2_0708_4 | HRGMv2_0708_4_56 | 55470 | 56594 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_0708_4 | HRGMv2_0708_4_57 | 56661 | 57884 | - | Hexapep | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_0708_4 | HRGMv2_0708_4_58 | 57913 | 59817 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_0708_4_52
Type: TC
Location: 50799 - 51983 (-)
Type: TC
Location: 50799 - 51983 (-)
Gene ID: HRGMv2_0708_4_53
Type: TC
Location: 51980 - 52756 (-)
Type: TC
Location: 51980 - 52756 (-)
Gene ID: HRGMv2_0708_4_54
Type: pfam
Location: 52972 - 53706 (-)
Type: pfam
Location: 52972 - 53706 (-)
Gene ID: HRGMv2_0708_4_55
Type: CAZyme
Location: 53787 - 55421 (-)
Type: CAZyme
Location: 53787 - 55421 (-)
Gene ID: HRGMv2_0708_4_56
Type: pfam
Location: 55470 - 56594 (-)
Type: pfam
Location: 55470 - 56594 (-)
Gene ID: HRGMv2_0708_4_57
Type: pfam
Location: 56661 - 57884 (-)
Type: pfam
Location: 56661 - 57884 (-)
Gene ID: HRGMv2_0708_4_58
Type: CAZyme
Location: 57913 - 59817 (-)
Type: CAZyme
Location: 57913 - 59817 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900540495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.