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Cluster: HRGMv2_0708_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0708_2 HRGMv2_0708_2_50 58815 60701 - 3.A.1.135.5
TC HRGMv2_0708_2 HRGMv2_0708_2_51 60703 62430 - 3.A.1.135.5
TF HRGMv2_0708_2 HRGMv2_0708_2_52 62427 62909 - MarR
pfam HRGMv2_0708_2 HRGMv2_0708_2_53 63119 64891 + MMR_HSR1 | GTP-bdg_N | GTP-bdg_M
TC HRGMv2_0708_2 HRGMv2_0708_2_54 65027 66196 + 2.A.4.7.4
TC HRGMv2_0708_2 HRGMv2_0708_2_55 66251 67531 + 2.A.1.84.3
CAZyme HRGMv2_0708_2 HRGMv2_0708_2_56 67528 69258 + GH2
TC HRGMv2_0708_2 HRGMv2_0708_2_57 69342 72062 - 3.A.3.2.28
pfam HRGMv2_0708_2 HRGMv2_0708_2_58 72321 73667 - ELFV_dehydrog | ELFV_dehydrog_N
TC HRGMv2_0708_2 HRGMv2_0708_2_59 73882 75711 - 3.A.16.1.1
Gene ID: HRGMv2_0708_2_50
Type: TC
Location: 58815 - 60701 (-)
Gene ID: HRGMv2_0708_2_51
Type: TC
Location: 60703 - 62430 (-)
Gene ID: HRGMv2_0708_2_52
Type: TF
Location: 62427 - 62909 (-)
Gene ID: HRGMv2_0708_2_53
Type: pfam
Location: 63119 - 64891 (+)
Gene ID: HRGMv2_0708_2_54
Type: TC
Location: 65027 - 66196 (+)
Gene ID: HRGMv2_0708_2_55
Type: TC
Location: 66251 - 67531 (+)
Gene ID: HRGMv2_0708_2_56
Type: CAZyme
Location: 67528 - 69258 (+)
Gene ID: HRGMv2_0708_2_57
Type: TC
Location: 69342 - 72062 (-)
Gene ID: HRGMv2_0708_2_58
Type: pfam
Location: 72321 - 73667 (-)
Gene ID: HRGMv2_0708_2_59
Type: TC
Location: 73882 - 75711 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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