Cluster: HRGMv2_0708_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0708
- CGC Family ID: CGCFAM_06024
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0708_20 | HRGMv2_0708_20_22 | 26266 | 26766 | - | 9.B.156.3.1 |
| TC | HRGMv2_0708_20 | HRGMv2_0708_20_23 | 26763 | 27377 | - | 9.B.156.3.1 |
| pfam | HRGMv2_0708_20 | HRGMv2_0708_20_24 | 27679 | 30321 | + | Transpeptidase | PBP_dimer | MecA_N |
| CAZyme | HRGMv2_0708_20 | HRGMv2_0708_20_25 | 30530 | 31606 | + | GT28 |
Gene ID: HRGMv2_0708_20_22
Type: TC
Location: 26266 - 26766 (-)
Type: TC
Location: 26266 - 26766 (-)
Gene ID: HRGMv2_0708_20_23
Type: TC
Location: 26763 - 27377 (-)
Type: TC
Location: 26763 - 27377 (-)
Gene ID: HRGMv2_0708_20_24
Type: pfam
Location: 27679 - 30321 (+)
Type: pfam
Location: 27679 - 30321 (+)
Gene ID: HRGMv2_0708_20_25
Type: CAZyme
Location: 30530 - 31606 (+)
Type: CAZyme
Location: 30530 - 31606 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900540495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.