Cluster: HRGMv2_0708_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0708
- CGC Family ID: CGCFAM_02334
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0708_11 | HRGMv2_0708_11_12 | 12638 | 15280 | + | 3.A.12.1.1 |
| pfam | HRGMv2_0708_11 | HRGMv2_0708_11_13 | 15277 | 16569 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_0708_11 | HRGMv2_0708_11_14 | 16566 | 17111 | + | 4.F.1.1.8 |
| pfam | HRGMv2_0708_11 | HRGMv2_0708_11_15 | 17108 | 18385 | + | MoCF_biosynth | CinA | CinA_KH |
| STP | HRGMv2_0708_11 | HRGMv2_0708_11_16 | 18442 | 19512 | + | ATPase_2 |
| CAZyme | HRGMv2_0708_11 | HRGMv2_0708_11_17 | 19654 | 20829 | + | GT4 |
Gene ID: HRGMv2_0708_11_12
Type: TC
Location: 12638 - 15280 (+)
Type: TC
Location: 12638 - 15280 (+)
Gene ID: HRGMv2_0708_11_13
Type: pfam
Location: 15277 - 16569 (+)
Type: pfam
Location: 15277 - 16569 (+)
Gene ID: HRGMv2_0708_11_14
Type: TC
Location: 16566 - 17111 (+)
Type: TC
Location: 16566 - 17111 (+)
Gene ID: HRGMv2_0708_11_15
Type: pfam
Location: 17108 - 18385 (+)
Type: pfam
Location: 17108 - 18385 (+)
Gene ID: HRGMv2_0708_11_16
Type: STP
Location: 18442 - 19512 (+)
Type: STP
Location: 18442 - 19512 (+)
Gene ID: HRGMv2_0708_11_17
Type: CAZyme
Location: 19654 - 20829 (+)
Type: CAZyme
Location: 19654 - 20829 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900540495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.