Cluster: HRGMv2_0708_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0708
- CGC Family ID: CGCFAM_00520
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0708_10 | HRGMv2_0708_10_25 | 28784 | 30337 | + | 2.A.2.3.3 |
| CAZyme | HRGMv2_0708_10 | HRGMv2_0708_10_26 | 30357 | 32591 | + | GH2 |
| TC | HRGMv2_0708_10 | HRGMv2_0708_10_27 | 33310 | 34317 | + | 3.A.1.24.1 |
| TC | HRGMv2_0708_10 | HRGMv2_0708_10_28 | 34319 | 34981 | + | 3.A.1.24.5 |
| TC | HRGMv2_0708_10 | HRGMv2_0708_10_29 | 35077 | 35877 | + | 3.A.1.24.5 |
Gene ID: HRGMv2_0708_10_25
Type: TC
Location: 28784 - 30337 (+)
Type: TC
Location: 28784 - 30337 (+)
Gene ID: HRGMv2_0708_10_26
Type: CAZyme
Location: 30357 - 32591 (+)
Type: CAZyme
Location: 30357 - 32591 (+)
Gene ID: HRGMv2_0708_10_27
Type: TC
Location: 33310 - 34317 (+)
Type: TC
Location: 33310 - 34317 (+)
Gene ID: HRGMv2_0708_10_28
Type: TC
Location: 34319 - 34981 (+)
Type: TC
Location: 34319 - 34981 (+)
Gene ID: HRGMv2_0708_10_29
Type: TC
Location: 35077 - 35877 (+)
Type: TC
Location: 35077 - 35877 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900540495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.