Cluster: HRGMv2_0707_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0707
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0707_4 | HRGMv2_0707_4_11 | 11960 | 12832 | - | 1.A.35.1.1 |
| CAZyme | HRGMv2_0707_4 | HRGMv2_0707_4_12 | 13030 | 14505 | - | GH20 |
| NULL(UNKNOWN) | HRGMv2_0707_4 | HRGMv2_0707_4_13 | 14517 | 17657 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_0707_4 | HRGMv2_0707_4_14 | 17710 | 18567 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0707_4 | HRGMv2_0707_4_15 | 18572 | 20257 | - | GH95 |
| pfam | HRGMv2_0707_4 | HRGMv2_0707_4_16 | 20196 | 20624 | - | DUF5703_N |
| CAZyme | HRGMv2_0707_4 | HRGMv2_0707_4_17 | 20612 | 22840 | - | GH78 |
Gene ID: HRGMv2_0707_4_11
Type: TC
Location: 11960 - 12832 (-)
Type: TC
Location: 11960 - 12832 (-)
Gene ID: HRGMv2_0707_4_12
Type: CAZyme
Location: 13030 - 14505 (-)
Type: CAZyme
Location: 13030 - 14505 (-)
Gene ID: HRGMv2_0707_4_13
Type:
Location: 14517 - 17657 (-)
Type:
Location: 14517 - 17657 (-)
Gene ID: HRGMv2_0707_4_14
Type: TF
Location: 17710 - 18567 (+)
Type: TF
Location: 17710 - 18567 (+)
Gene ID: HRGMv2_0707_4_15
Type: CAZyme
Location: 18572 - 20257 (-)
Type: CAZyme
Location: 18572 - 20257 (-)
Gene ID: HRGMv2_0707_4_16
Type: pfam
Location: 20196 - 20624 (-)
Type: pfam
Location: 20196 - 20624 (-)
Gene ID: HRGMv2_0707_4_17
Type: CAZyme
Location: 20612 - 22840 (-)
Type: CAZyme
Location: 20612 - 22840 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
CAJMQN01
Species
CAJMQN01 sp905215695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.