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Cluster: HRGMv2_0707_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0707_3 HRGMv2_0707_3_359 444945 445967 + GH177
CAZyme HRGMv2_0707_3 HRGMv2_0707_3_360 445964 447553 + GH13_44
TF HRGMv2_0707_3 HRGMv2_0707_3_361 447672 448442 - 0036286
NULL(UNKNOWN) HRGMv2_0707_3 HRGMv2_0707_3_362 448643 450637 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0707_3 HRGMv2_0707_3_363 450765 451613 + 3.A.1.1.34
NULL(UNKNOWN) HRGMv2_0707_3 HRGMv2_0707_3_364 451648 453036 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0707_3 HRGMv2_0707_3_365 453057 454457 + SBP_bac_1
TC HRGMv2_0707_3 HRGMv2_0707_3_366 454470 455375 + 3.A.1.1.42
Gene ID: HRGMv2_0707_3_359
Type: CAZyme
Location: 444945 - 445967 (+)
Gene ID: HRGMv2_0707_3_360
Type: CAZyme
Location: 445964 - 447553 (+)
Gene ID: HRGMv2_0707_3_361
Type: TF
Location: 447672 - 448442 (-)
Gene ID: HRGMv2_0707_3_362
Type:
Location: 448643 - 450637 (+)
Gene ID: HRGMv2_0707_3_363
Type: TC
Location: 450765 - 451613 (+)
Gene ID: HRGMv2_0707_3_364
Type:
Location: 451648 - 453036 (+)
Gene ID: HRGMv2_0707_3_365
Type: STP
Location: 453057 - 454457 (+)
Gene ID: HRGMv2_0707_3_366
Type: TC
Location: 454470 - 455375 (+)

Taxonomic Lineage

Domain
Bacteria
Family
HGM11417

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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