Cluster: HRGMv2_0707_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0707
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0707_1 | HRGMv2_0707_1_125 | 165810 | 167456 | + | 4.C.1.1.16 |
| pfam | HRGMv2_0707_1 | HRGMv2_0707_1_126 | 167453 | 167794 | + | YjbR |
| TC | HRGMv2_0707_1 | HRGMv2_0707_1_127 | 167822 | 170425 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_0707_1 | HRGMv2_0707_1_128 | 170438 | 171094 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0707_1 | HRGMv2_0707_1_129 | 171330 | 173045 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0707_1 | HRGMv2_0707_1_130 | 173061 | 173975 | + | 3.A.1.1.21 |
| TC | HRGMv2_0707_1 | HRGMv2_0707_1_131 | 173985 | 174881 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | HRGMv2_0707_1 | HRGMv2_0707_1_132 | 174901 | 177861 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0707_1 | HRGMv2_0707_1_133 | 177872 | 179779 | + | GH163 |
| pfam | HRGMv2_0707_1 | HRGMv2_0707_1_134 | 179794 | 180660 | + | GFO_IDH_MocA |
| pfam | HRGMv2_0707_1 | HRGMv2_0707_1_135 | 180681 | 181454 | + | Glucosamine_iso |
| CAZyme | HRGMv2_0707_1 | HRGMv2_0707_1_136 | 181478 | 183289 | + | CE2 |
Gene ID: HRGMv2_0707_1_125
Type: TC
Location: 165810 - 167456 (+)
Type: TC
Location: 165810 - 167456 (+)
Gene ID: HRGMv2_0707_1_126
Type: pfam
Location: 167453 - 167794 (+)
Type: pfam
Location: 167453 - 167794 (+)
Gene ID: HRGMv2_0707_1_127
Type: TC
Location: 167822 - 170425 (-)
Type: TC
Location: 167822 - 170425 (-)
Gene ID: HRGMv2_0707_1_128
Type:
Location: 170438 - 171094 (-)
Type:
Location: 170438 - 171094 (-)
Gene ID: HRGMv2_0707_1_129
Type:
Location: 171330 - 173045 (+)
Type:
Location: 171330 - 173045 (+)
Gene ID: HRGMv2_0707_1_130
Type: TC
Location: 173061 - 173975 (+)
Type: TC
Location: 173061 - 173975 (+)
Gene ID: HRGMv2_0707_1_131
Type: TC
Location: 173985 - 174881 (+)
Type: TC
Location: 173985 - 174881 (+)
Gene ID: HRGMv2_0707_1_132
Type:
Location: 174901 - 177861 (+)
Type:
Location: 174901 - 177861 (+)
Gene ID: HRGMv2_0707_1_133
Type: CAZyme
Location: 177872 - 179779 (+)
Type: CAZyme
Location: 177872 - 179779 (+)
Gene ID: HRGMv2_0707_1_134
Type: pfam
Location: 179794 - 180660 (+)
Type: pfam
Location: 179794 - 180660 (+)
Gene ID: HRGMv2_0707_1_135
Type: pfam
Location: 180681 - 181454 (+)
Type: pfam
Location: 180681 - 181454 (+)
Gene ID: HRGMv2_0707_1_136
Type: CAZyme
Location: 181478 - 183289 (+)
Type: CAZyme
Location: 181478 - 183289 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
CAJMQN01
Species
CAJMQN01 sp905215695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.