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Cluster: HRGMv2_0707_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0707_2 HRGMv2_0707_2_546 622432 625095 + 3.A.3.2.21
TC HRGMv2_0707_2 HRGMv2_0707_2_547 625183 626358 + 2.A.4.7.6
peptidase HRGMv2_0707_2 HRGMv2_0707_2_548 626368 627297 + S33.UPW
pfam HRGMv2_0707_2 HRGMv2_0707_2_549 627294 628049 + DNA_alkylation
CAZyme HRGMv2_0707_2 HRGMv2_0707_2_550 628046 629683 + GH78
Gene ID: HRGMv2_0707_2_546
Type: TC
Location: 622432 - 625095 (+)
Gene ID: HRGMv2_0707_2_547
Type: TC
Location: 625183 - 626358 (+)
Gene ID: HRGMv2_0707_2_548
Type: peptidase
Location: 626368 - 627297 (+)
Gene ID: HRGMv2_0707_2_549
Type: pfam
Location: 627294 - 628049 (+)
Gene ID: HRGMv2_0707_2_550
Type: CAZyme
Location: 628046 - 629683 (+)

Taxonomic Lineage

Domain
Bacteria
Family
HGM11417

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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