Cluster: HRGMv2_0707_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0707
- CGC Family ID: CGCFAM_04008
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0707_2 | HRGMv2_0707_2_495 | 556441 | 557808 | + | GH1 |
| STP | HRGMv2_0707_2 | HRGMv2_0707_2_496 | 557805 | 559058 | + | SBP_bac_1 |
| pfam | HRGMv2_0707_2 | HRGMv2_0707_2_497 | 559070 | 560014 | + | BPD_transp_1 |
| TC | HRGMv2_0707_2 | HRGMv2_0707_2_498 | 560014 | 560877 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_0707_2 | HRGMv2_0707_2_499 | 560898 | 563336 | + | GH5 |
| CAZyme | HRGMv2_0707_2 | HRGMv2_0707_2_500 | 563352 | 566618 | + | CBM23 |
Gene ID: HRGMv2_0707_2_495
Type: CAZyme
Location: 556441 - 557808 (+)
Type: CAZyme
Location: 556441 - 557808 (+)
Gene ID: HRGMv2_0707_2_496
Type: STP
Location: 557805 - 559058 (+)
Type: STP
Location: 557805 - 559058 (+)
Gene ID: HRGMv2_0707_2_497
Type: pfam
Location: 559070 - 560014 (+)
Type: pfam
Location: 559070 - 560014 (+)
Gene ID: HRGMv2_0707_2_498
Type: TC
Location: 560014 - 560877 (+)
Type: TC
Location: 560014 - 560877 (+)
Gene ID: HRGMv2_0707_2_499
Type: CAZyme
Location: 560898 - 563336 (+)
Type: CAZyme
Location: 560898 - 563336 (+)
Gene ID: HRGMv2_0707_2_500
Type: CAZyme
Location: 563352 - 566618 (+)
Type: CAZyme
Location: 563352 - 566618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
CAJMQN01
Species
CAJMQN01 sp905215695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.