Cluster: HRGMv2_0707_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0707
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0707_2 | HRGMv2_0707_2_330 | 354635 | 355561 | + | 3.A.1.1.20 |
| TC | HRGMv2_0707_2 | HRGMv2_0707_2_331 | 355563 | 356471 | + | 3.A.1.1.12 |
| NULL(UNKNOWN) | HRGMv2_0707_2 | HRGMv2_0707_2_332 | 356490 | 359441 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0707_2 | HRGMv2_0707_2_333 | 359444 | 361279 | + | GH163 |
| pfam | HRGMv2_0707_2 | HRGMv2_0707_2_334 | 361328 | 366022 | + | Big_2 | Big_2 |
| pfam | HRGMv2_0707_2 | HRGMv2_0707_2_335 | 366039 | 366938 | + | AP_endonuc_2 |
| TC | HRGMv2_0707_2 | HRGMv2_0707_2_336 | 366949 | 367596 | + | 9.B.20.1.4 |
Gene ID: HRGMv2_0707_2_330
Type: TC
Location: 354635 - 355561 (+)
Type: TC
Location: 354635 - 355561 (+)
Gene ID: HRGMv2_0707_2_331
Type: TC
Location: 355563 - 356471 (+)
Type: TC
Location: 355563 - 356471 (+)
Gene ID: HRGMv2_0707_2_332
Type:
Location: 356490 - 359441 (+)
Type:
Location: 356490 - 359441 (+)
Gene ID: HRGMv2_0707_2_333
Type: CAZyme
Location: 359444 - 361279 (+)
Type: CAZyme
Location: 359444 - 361279 (+)
Gene ID: HRGMv2_0707_2_334
Type: pfam
Location: 361328 - 366022 (+)
Type: pfam
Location: 361328 - 366022 (+)
Gene ID: HRGMv2_0707_2_335
Type: pfam
Location: 366039 - 366938 (+)
Type: pfam
Location: 366039 - 366938 (+)
Gene ID: HRGMv2_0707_2_336
Type: TC
Location: 366949 - 367596 (+)
Type: TC
Location: 366949 - 367596 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
CAJMQN01
Species
CAJMQN01 sp905215695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.